STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_4264PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: atc:AGR_pAT_564 short chain dehydrogenase. (249 aa)    
Predicted Functional Partners:
Acid_4265
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sma:SAV1200 dehydrogenase.
  
   0.787
Acid_0540
PFAM: short-chain dehydrogenase/reductase SDR; Male sterility C-terminal domain; KR; KEGG: sco:SCO4764 putative dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
   0.762
Acid_3397
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpb:RPB_0526 short-chain dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.760
Acid_3077
PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; KR; KEGG: aba:Acid345_0465 beta-ketoacyl synthase.
  
 
 0.685
Acid_3006
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.617
Acid_1784
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: xcv:XCV3546 short chain dehydrogenase.
 
     0.615
Acid_4266
Hypothetical protein.
       0.548
Acid_1972
PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; 2-nitropropane dioxygenase, NPD; KR; KEGG: fra:Francci3_0926 beta-ketoacyl synthase.
  
 
 0.546
Acid_0818
1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: deh:cbdb_A1296 carbohydrate kinase, PfkB family; Belongs to the carbohydrate kinase PfkB family.
   
  
 0.457
Acid_4267
PFAM: protein of unknown function DUF214; KEGG: gvi:gll1201 unknown protein.
  
    0.445
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.