Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
Acid_4292KEGG: aba:Acid345_0807 hypothetical protein. (175 aa)    
Predicted Functional Partners:
Acid_4291
Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: syf:Synpcc7942_1816 periplasmic sensor hybrid histidine kinase.
  
  
 0.815
Acid_7826
Inner-membrane translocator; PFAM: periplasmic binding protein/LacI transcriptional regulator; inner-membrane translocator; KEGG: sco:SCO2747 bifunctional carbohydrate binding and transport protein; Belongs to the binding-protein-dependent transport system permease family.
     
 0.760
Acid_0862
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfo:Pfl_1341 ABC transporter-like.
     
 0.750
Acid_6716
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV3608 putative ABC transporter ATP-binding protein.
     
 0.735
Acid_6715
PFAM: cobalt transport protein; KEGG: gsu:GSU1280 cobalt ABC transporter, permease protein.
     
 0.734
Acid_3459
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr1357 peptide ABC transporter ATP-binding protein.
     
 0.729
Acid_1203
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ava:Ava_2959 substrate-binding region of ABC-type glycine betaine transport system.
   
 
 0.725
Acid_0582
PFAM: protein of unknown function DUF140; KEGG: aba:Acid345_2890 protein of unknown function DUF140; Belongs to the MlaE permease family.
    
  0.723
Acid_6714
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: ava:Ava_1755 cobalamin (vitamin B12) biosynthesis CbiM protein.
     
 0.718
Acid_1204
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ana:alr0973 permease protein of ABC transporter.
     
  0.708
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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