Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_4342PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1; KEGG: xac:XAC3110 glycosyltransferase. (746 aa)    
Predicted Functional Partners:
Acid_7288
PFAM: sugar transferase; KEGG: ade:Adeh_2455 undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.920
Acid_5707
PFAM: transferase hexapeptide repeat containing protein; WxcM domain protein, C-terminal domain protein; KEGG: lipopolysaccharide biosynthesis protein.
  
  
 0.815
Acid_6227
PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; KEGG: bha:BH3366 spore coat polysaccharide synthesis (dTDP-4-dehydrorhamnose 3,5-epimerase).
 
  
 0.798
Acid_7441
PFAM: glycosyl transferase, family 2; KEGG: rme:Rmet_2729 glycosyl transferase, family 2.
  
    0.733
Acid_5285
Glycosyltransferase-like protein; KEGG: mca:MCA1435 glycosyl transferase, group 2 family.
  
    0.725
Acid_7732
DNA topoisomerase III; KEGG: cac:CAC3567 topoisomerase B; TIGRFAM: ATP-dependent DNA helicase, RecQ family; DNA topoisomerase III; PFAM: helicase domain protein; HRDC domain protein; TOPRIM domain protein; DEAD/DEAH box helicase domain protein; DNA topoisomerase, type IA, central domain protein; SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein; DEAD-like helicases-like.
   
 
 0.712
Acid_6233
PFAM: glycosyl transferase, group 1; Methyltransferase type 11; KEGG: rba:RB9627 probable mannosyltransferase A (MtfA).
 
  
 0.706
Acid_0136
PFAM: glycosyl transferase, family 2; KEGG: afu:AF0321 glycosyl transferase.
  
    0.684
Acid_6226
PFAM: Nucleotidyl transferase; KEGG: mac:MA2183 glucose-1-phosphate thymidylyltransferase.
 
  
 0.661
Acid_1214
PFAM: sugar transferase; KEGG: gme:Gmet_2031 sugar transferase.
 
  
 0.645
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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