STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_4356PFAM: glycosyl transferase, family 2; KEGG: smu:SMU.834 hypothetical protein. (342 aa)    
Predicted Functional Partners:
Acid_4354
PFAM: Alg9 family protein mannosyltransferase; KEGG: nar:Saro_2282 Alg9-like mannosyltransferase.
  
    0.792
Acid_4355
KEGG: mag:amb2737 hypothetical protein.
       0.773
Acid_2125
PFAM: glycosyl transferase, family 2; Methyltransferase type 11; Methyltransferase type 12; KEGG: cte:CT0443 glycosyl transferase.
  
     0.703
Acid_7491
PFAM: glycosyl transferase, family 2; Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: lip:LIC024 glycosyltransferases involved in cell wall biogenesis.
  
     0.690
Acid_4352
PFAM: glycosyl transferase, family 2; Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_4293 glycosyl transferase, family 2.
  
     0.597
Acid_7120
PFAM: glycosyl transferase, family 2; KEGG: mta:Moth_2228 glycosyl transferase, family 2.
  
     0.585
Acid_4635
PFAM: glycosyl transferase, family 2; KEGG: rpd:RPD_0757 glycosyl transferase, family 2.
  
     0.579
Acid_4357
PFAM: Methyltransferase type 11; Methyltransferase type 12.
       0.558
Acid_7158
PFAM: glycosyl transferase, family 2; Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_4293 glycosyl transferase, family 2.
  
     0.555
Acid_4358
KEGG: lpp:lpp0676 hypothetical protein.
       0.537
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.