STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_4464PFAM: putative esterase; glycoside hydrolase, family 13 domain protein; KEGG: aba:Acid345_1859 putative esterase. (394 aa)    
Predicted Functional Partners:
Acid_2664
PFAM: lipolytic enzyme, G-D-S-L family; KEGG: rba:RB4014 probable acetyl xylan esterase.
  
     0.584
Acid_2681
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase, family 10; KEGG: sde:Sde_2633 endo-1,4-beta-xylanase.
   0.564
Acid_4463
PFAM: GAF domain protein; ANTAR domain protein; KEGG: aba:Acid345_3439 serine phosphatase.
       0.538
Acid_3934
PFAM: putative esterase; KEGG: pfu:PF1108 putative alpha-dextrin endo-1,6-alpha-glucosidase.
 
  
 0.532
Acid_2993
PFAM: glycoside hydrolase, family 43; KEGG: bfs:BF0575 putative glycosyl hydrolase/xylanase.
 
   
 0.485
Acid_3430
Gluconolactonase; PFAM: putative esterase; NHL repeat containing protein; SMP-30/Gluconolaconase/LRE domain protein; KEGG: rba:RB9732 probable gluconolactonase precursor-hypothetical secreted or membrane associated protein.
  
     0.460
Acid_6297
Hypothetical protein; KEGG: rba:RB3550 probable endo-1,4-beta-xylanase B.
 
     0.448
Acid_2648
PFAM: putative esterase; SMP-30/Gluconolaconase/LRE domain protein; KEGG: rba:RB9732 probable gluconolactonase precursor-hypothetical secreted or membrane associated protein.
  
     0.438
Acid_2104
PFAM: protein of unknown function DUF303, acetylesterase putative; glycoside hydrolase family 2, sugar binding; KEGG: bth:BT4091 sialic acid-specific 9-O-acetylesterase.
  
     0.417
Acid_0259
KEGG: tfu:Tfu_2984 hypothetical protein.
 
     0.411
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.