Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Acid_4476PFAM: protein of unknown function DUF1486; KEGG: bxe:Bxe_B1094 hypothetical protein. (138 aa)    
Predicted Functional Partners:
Acid_4477
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mlo:mlr5280 glucose dehydrogenase.
 
     0.609
Acid_4479
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: bxe:Bxe_B1096 glucose dehydrogenase.
 
     0.559
Acid_4377
TIGRFAM: phosphonoacetate hydrolase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: pol:Bpro_3220 phosphonoacetate hydrolase.
  
     0.554
Acid_4478
PFAM: Semialdehyde dehydrogenase, NAD - binding; NADP oxidoreductase, coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bja:bll3990 hypothetical protein.
 
     0.509
Acid_0517
PFAM: Cupin 2, conserved barrel domain protein; KEGG: ret:RHE_CH03293 hypothetical protein.
  
     0.463
Acid_2784
KEGG: mlo:mll4584 hypothetical protein.
  
     0.455
Acid_5271
PFAM: Cupin 2, conserved barrel domain protein; KEGG: aba:Acid345_3724 conserved hypothetical protein, cupin barrel.
  
     0.406
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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