STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_4497PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: aba:Acid345_1169 transcriptional regulator, CadC. (821 aa)    
Predicted Functional Partners:
Acid_1311
Transcriptional regulator, Fis family; PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; KEGG: mta:Moth_0909 protein serine/threonine phosphatases.
 
   0.825
Acid_3274
PFAM: protein phosphatase 2C domain protein; KEGG: mta:Moth_0909 protein serine/threonine phosphatases.
 
   0.823
Acid_7519
PFAM: protein phosphatase 2C domain protein; KEGG: cya:CYA_0212 protein phosphatase 2C family protein.
 
   0.823
Acid_4313
PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein; KEGG: bld:BLi01797 protein phosphatase; RBL04052.
 
   0.822
Acid_0299
KEGG: aba:Acid345_0263 serine/threonine protein kinase.
  
     0.729
Acid_1856
Serine phosphatase; PFAM: Forkhead-associated protein; GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: aba:Acid345_2718 serine phosphatase.
  
 
 0.598
Acid_3432
Serine phosphatase; PFAM: Forkhead-associated protein; GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rba:RB7190 conserved hypothetical protein, putative regulatory protein.
 
 
 0.510
Acid_1303
Adenylate/guanylate cyclase; PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: sme:SMa1591 putative adenylate cyclase.
 
   
0.482
Acid_2466
PFAM: protein kinase; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; Tetratricopeptide domain protein; KEGG: aba:Acid345_1052 serine/threonine protein kinase with TPR repeats.
 
 
0.439
Acid_5676
PFAM: protein kinase; protein of unknown function DUF323; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: aba:Acid345_2578 serine/threonine protein kinase.
 
   
0.436
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.