STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_4516PFAM: ABC-2 type transporter; KEGG: tte:TTE2144 ABC-type transport system involved in multi-copper enzyme maturation, permease component. (255 aa)    
Predicted Functional Partners:
Acid_4515
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cya:CYA_2882 ABC transporter, ATP-binding protein.
 
 0.980
Acid_4517
KEGG: cyb:CYB_1659 hypothetical protein.
 
  
 0.964
Acid_4518
KEGG: cya:CYA_2879 hypothetical protein.
 
     0.950
Acid_4771
KEGG: mlo:mll4444 hypothetical protein.
  
 
 0.919
Acid_6574
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ctc:CTC00633 transporter.
 
 0.711
Acid_7106
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ctc:CTC00633 transporter.
 
 0.694
Acid_5244
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ctc:CTC00633 transporter.
 
 0.693
Acid_5638
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ctc:CTC00633 transporter.
 
 0.692
Acid_7689
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO3956 putative ABC transporter ATP-binding protein.
 
 0.677
Acid_1126
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mca:MCA1561 ABC transporter, ATP-binding protein.
 
 0.675
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.