STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_4532Hypothetical protein. (245 aa)    
Predicted Functional Partners:
Acid_3441
PFAM: putative esterase; phospholipase/Carboxylesterase; KEGG: dra:DR0657 serine esterase, putative.
     
 0.799
Acid_4533
PFAM: Pyrrolo-quinoline quinone; KEGG: aba:Acid345_4167 pyrrolo-quinoline quinone.
       0.773
Acid_1894
PFAM: Erythromycin esterase; KEGG: hal:VNG1811G succinoglycan biosynthesis.
   
    0.709
Acid_0818
1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: deh:cbdb_A1296 carbohydrate kinase, PfkB family; Belongs to the carbohydrate kinase PfkB family.
   
    0.633
Acid_4531
PFAM: protein of unknown function DUF1080; KEGG: rba:RB569 conserved hypothetical protein, putative secreted protein.
       0.568
Acid_4530
KEGG: sde:Sde_1284 hypothetical protein.
       0.486
Acid_4529
PFAM: protein of unknown function DUF214; KEGG: gvi:gll1201 unknown protein.
  
    0.444
Acid_4810
PFAM: short-chain dehydrogenase/reductase SDR; MaoC domain protein dehydratase; KEGG: pfo:Pfl_0654 MaoC-like dehydratase.
    
 0.400
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.