Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_4584Hypothetical protein. (98 aa)    
Predicted Functional Partners:
Acid_4585
PFAM: glutamine amidotransferase class-I; KEGG: syn:slr0541 hypothetical protein.
       0.773
Acid_4586
N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; KEGG: aba:Acid345_1153 N-acetylmuramoyl-L-alanine amidase.
       0.773
Acid_4587
PFAM: Lytic transglycosylase, catalytic; KEGG: pca:Pcar_1321 lytic murein transglycosylase, putative.
       0.757
Acid_4583
Response regulator receiver protein.
       0.532
Acid_4588
Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
       0.419
Acid_4589
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_2886 ABC transporter, ATPase subunit.
       0.419
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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