Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_4607Beta-galactosidase; PFAM: glycoside hydrolase, family 42, domain 5, loop region; glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; KEGG: aba:Acid345_4484 glycoside hydrolase family 2, TIM barrel. (1030 aa)    
Predicted Functional Partners:
Acid_6569
beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase, family 20; KEGG: aba:Acid345_3493 beta-N-acetylhexosaminidase.
 
 0.933
Acid_3086
beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase, family 20; KEGG: aba:Acid345_3493 beta-N-acetylhexosaminidase.
 
 0.932
Acid_0193
Exo-alpha-sialidase; KEGG: sma:SAV5606 neuramidase.
 
  
 0.928
Acid_1458
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.925
Acid_6305
PFAM: sulfatase; KEGG: ptr:465478 steryl-sulfatase.
  
 
  0.921
Acid_3047
PFAM: Aldose 1-epimerase; KEGG: mpa:MAP3850c hypothetical protein.
  
 
 0.908
Acid_4998
PFAM: Aldose 1-epimerase; KEGG: mpa:MAP3850c hypothetical protein.
  
 
 0.908
Acid_2638
Glucosylceramidase; PFAM: glycoside hydrolase, family 30; KEGG: sde:Sde_2994 glucosylceramidase; Belongs to the glycosyl hydrolase 30 family.
  
 
 0.905
Acid_2871
PFAM: sulfatase; KEGG: rba:RB13148 iduronate-sulfatase or arylsulfatase A.
    
  0.905
Acid_1399
PFAM: glycosyl transferase, family 2; KEGG: rba:RB9648 probable ceramide glucosyltransferase.
     
  0.900
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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