Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_4635PFAM: glycosyl transferase, family 2; KEGG: rpd:RPD_0757 glycosyl transferase, family 2. (220 aa)    
Predicted Functional Partners:
Acid_4636
KEGG: mja:MJ1580 hypothetical protein.
     
 0.777
Acid_7439
PFAM: glycosyl transferase, family 2; KEGG: pto:PTO1343 glycosyltransferase.
  
     0.747
Acid_3828
PFAM: glycosyl transferase, family 2; KEGG: ana:all4126 dolichol-phosphate mannosyltransferase.
  
     0.718
Acid_4634
Hypothetical protein; KEGG: chy:CHY_1049 dolichyl-phosphate-mannose-protein mannosyltransferase.
  
    0.656
Acid_2163
PFAM: glycosyl transferase, family 2; KEGG: ret:RHE_CH00766 probable glycosyltransferase protein.
  
     0.646
Acid_4356
PFAM: glycosyl transferase, family 2; KEGG: smu:SMU.834 hypothetical protein.
  
     0.579
Acid_4633
KEGG: cac:CAC0024 membrane protein, related to Actinobacillus protein (1944168).
 
     0.566
Acid_2340
PFAM: glycosyl transferase, family 2; KEGG: pst:PSPTO_1071 glycosyl transferase, group 2 family protein.
  
     0.549
Acid_0280
PFAM: glycosyl transferase, family 2; KEGG: mlo:mll5672 probable sugar transferase.
  
     0.504
Acid_7119
PFAM: glycosyl transferase, family 2; KEGG: rxy:Rxyl_3118 glycosyl transferase, family 2.
  
     0.500
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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