STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_4645PFAM: glycosyl transferase, family 2; KEGG: ana:all0914 probable glycosyl transferase. (321 aa)    
Predicted Functional Partners:
Acid_4648
PFAM: glycosyl transferase, family 2; KEGG: bpm:BURPS1710b_A1381 glycosyl transferase, group 2 family protein.
 
    0.868
Acid_4644
PFAM: oxidoreductase domain protein; KEGG: bms:BRA0109 oxidoreductase, Gfo/Idh/MocA family.
 
     0.800
Acid_6942
PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1; KEGG: pfo:Pfl_4067 glycosyl transferase.
  
    0.773
Acid_4643
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mka:MK0156 predicted pyridoxal-phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.720
Acid_4647
PFAM: glycosyl transferase, family 2; KEGG: mlo:mlr1946 probable glycosyl transferase.
 
     0.698
Acid_4639
PFAM: lipopolysaccharide biosynthesis; KEGG: aba:Acid345_3310 protein-tyrosine kinase.
 
  
 0.689
Acid_4642
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bce:BC2803 ubiquinone/menaquinone biosynthesis methyltransferase UBIE.
       0.683
Acid_4641
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU1505 ABC transporter, ATP-binding protein.
 
  
 0.666
Acid_7288
PFAM: sugar transferase; KEGG: ade:Adeh_2455 undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.665
Acid_4646
Acetyltransferase (isoleucine patch superfamily)-like protein; KEGG: gka:GK1921 maltose transacetylase (maltose O-acetyltransferase).
 
  
 0.656
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.