Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_4656PFAM: transferase hexapeptide repeat containing protein; KEGG: rsp:RSP_7375 acetyltransferase (isoleucine patch superfamily). (194 aa)    
Predicted Functional Partners:
Acid_4654
PFAM: glycosyl transferase, group 1; KEGG: bxe:Bxe_A3856 putative transferase.
  
 0.894
Acid_4655
PFAM: glycosyl transferase, group 1; KEGG: fra:Francci3_1293 glycosyl transferase, group 1.
  
  
 0.799
Acid_7288
PFAM: sugar transferase; KEGG: ade:Adeh_2455 undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.771
Acid_0619
PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1; KEGG: dvu:DVUA0071 glycosyl transferase, group 1/2 family protein.
 
  
 0.623
Acid_0615
PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1; KEGG: dvu:DVUA0071 glycosyl transferase, group 1/2 family protein.
 
  
 0.605
Acid_4639
PFAM: lipopolysaccharide biosynthesis; KEGG: aba:Acid345_3310 protein-tyrosine kinase.
 
  
 0.605
Acid_4651
PFAM: glycosyl transferase, group 1; KEGG: ana:alr5237 probable glycosyl transferase.
 
  
 0.543
Acid_5707
PFAM: transferase hexapeptide repeat containing protein; WxcM domain protein, C-terminal domain protein; KEGG: lipopolysaccharide biosynthesis protein.
 
  
 0.518
Acid_4643
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mka:MK0156 predicted pyridoxal-phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.516
Acid_4646
Acetyltransferase (isoleucine patch superfamily)-like protein; KEGG: gka:GK1921 maltose transacetylase (maltose O-acetyltransferase).
 
    
0.512
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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