Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_4697PFAM: protein of unknown function DUF72; KEGG: bpm:BURPS1710b_1059 hypothetical protein. (316 aa)    
Predicted Functional Partners:
Acid_4698
Gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: sil:SPO0866 gamma-glutamyltranspeptidase, putative.
       0.773
Acid_4696
Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: lic:LIC10550 anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
       0.709
Acid_3072
KEGG: rba:RB4621 hypothetical protein-signal peptide prediction.
  
    0.673
Acid_4685
PFAM: Ig family protein; SMART: PKD domain containing protein; Dystroglycan-type cadherin domain protein; KEGG: mmu:239611 mucin 19.
  
     0.666
Acid_6881
PFAM: Ig family protein; SMART: PKD domain containing protein; KEGG: xcb:XC_4290 hemagglutinin.
  
     0.633
Acid_6147
KEGG: mma:MM1645 hypothetical protein.
  
     0.590
Acid_5674
Hypothetical protein.
  
     0.535
Acid_5711
Hypothetical protein; KEGG: rba:RB5247 putative WD-repeat containing protein.
  
     0.525
Acid_7737
PFAM: Cupin 2, conserved barrel domain protein; KEGG: hma:rrnB0187 putative cupin.
  
     0.511
Acid_0930
PFAM: protein of unknown function DUF1552; KEGG: rba:RB12022 hypothetical protein.
  
     0.501
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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