STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_4851PFAM: protein of unknown function DUF202; KEGG: syn:sll0847 hypothetical protein. (131 aa)    
Predicted Functional Partners:
Acid_4850
KEGG: eli:ELI_10470 hypothetical protein.
 
     0.810
Acid_4852
PFAM: sulfatase; KEGG: mac:MA2645 arylsulfatase.
 
     0.753
Acid_4849
PFAM: Radical SAM domain protein; KEGG: mac:MA2647 arylsulfatase regulator.
 
     0.683
Acid_5306
PFAM: sulfatase; KEGG: sme:SMb20915 putative arylsulfatase protein.
 
     0.633
Acid_4083
PFAM: sulfatase; KEGG: bja:bll4741 putative arylsulfatase protein.
 
     0.573
Acid_3386
PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: reu:Reut_A0382 protein of unknown function DUF1214/protein of unknown function DUF1254.
 
     0.504
Acid_4848
PFAM: beta-lactamase; KEGG: rba:RB12928 conserved hypothetical protein, putative beta-lactamase or penicillin-binding protein.
       0.491
Acid_6559
KEGG: sma:SAV7370 hypothetical protein.
  
     0.459
Acid_6557
KEGG: rha:RHA1_ro04605 possible nitrogen fixation protein.
  
     0.451
Acid_6558
KEGG: sma:SAV7369 hypothetical protein.
  
     0.430
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
Server load: medium (68%) [ZH]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.