STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_4852PFAM: sulfatase; KEGG: mac:MA2645 arylsulfatase. (784 aa)    
Predicted Functional Partners:
Acid_7564
PFAM: protein of unknown function DUF323; KEGG: bja:bll4742 hypothetical protein.
 
   0.770
Acid_4849
PFAM: Radical SAM domain protein; KEGG: mac:MA2647 arylsulfatase regulator.
 
   0.767
Acid_4851
PFAM: protein of unknown function DUF202; KEGG: syn:sll0847 hypothetical protein.
 
     0.753
Acid_6305
PFAM: sulfatase; KEGG: ptr:465478 steryl-sulfatase.
  
     0.737
Acid_5402
KEGG: pmt:PMT1514 possible neuromedin U.
 
     0.704
Acid_7168
PFAM: Tetratricopeptide TPR_4; KEGG: bja:bll2660 hypothetical protein.
  
     0.647
Acid_3386
PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: reu:Reut_A0382 protein of unknown function DUF1214/protein of unknown function DUF1254.
 
     0.643
Acid_3388
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:bll2660 hypothetical protein.
  
     0.591
Acid_6646
PFAM: Radical SAM domain protein; KEGG: bth:BT0238 transcriptional regulator.
 
   0.566
Acid_4854
KEGG: bbr:BB2726 hypothetical protein.
 
     0.549
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.