Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Acid_4908PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: rba:RB5727 probable oxidoreductase. (337 aa)    
Predicted Functional Partners:
Acid_4909
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rba:RB1210 probable hexulose-6-phosphate isomerase.
 
    0.860
Acid_5955
PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: sso:SSO3049 dehydrogenase, putative.
  
     0.773
Acid_0174
PFAM: oxidoreductase domain protein; KEGG: bth:BT3583 putative dehydrogenase and relate proteins.
  
     0.772
Acid_0417
PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: lip:LIC012 putative LmbZ.
  
     0.763
Acid_4014
PFAM: oxidoreductase domain protein; KEGG: rba:RB3442 probable dehydrogenase.
  
     0.762
Acid_4454
PFAM: oxidoreductase domain protein; KEGG: rba:RB9026 probable NADH-dependent dyhydrogenase.
  
     0.740
Acid_3906
PFAM: oxidoreductase domain protein; KEGG: tma:TM0425 oxidoreductase, putative.
  
     0.732
Acid_0844
PFAM: oxidoreductase domain protein; KEGG: rba:RB12564 probable NADH-dependent dehydrogenase homolog.
  
     0.720
Acid_0753
PFAM: oxidoreductase domain protein; KEGG: rba:RB3442 probable dehydrogenase.
  
     0.686
Acid_1988
PFAM: oxidoreductase domain protein; KEGG: bth:BT4448 putative dehydrogenase.
  
     0.666
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.