Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Acid_0106 | Acid_4928 | KEGG: aba:Acid345_2515 putative anti-sigma regulatory factor, serine/threonine protein kinase. | KEGG: aba:Acid345_2012 hypothetical protein. | 0.411 |
Acid_1844 | Acid_4617 | KEGG: bat:BAS2535 hypothetical protein. | KEGG: aba:Acid345_4433 hypothetical protein. | 0.728 |
Acid_1844 | Acid_4928 | KEGG: bat:BAS2535 hypothetical protein. | KEGG: aba:Acid345_2012 hypothetical protein. | 0.439 |
Acid_1898 | Acid_4928 | KEGG: gvi:gll4136 unknown protein. | KEGG: aba:Acid345_2012 hypothetical protein. | 0.429 |
Acid_2036 | Acid_4928 | KEGG: ani:AN3569.2 hypothetical protein. | KEGG: aba:Acid345_2012 hypothetical protein. | 0.466 |
Acid_4617 | Acid_1844 | KEGG: aba:Acid345_4433 hypothetical protein. | KEGG: bat:BAS2535 hypothetical protein. | 0.728 |
Acid_4617 | Acid_4928 | KEGG: aba:Acid345_4433 hypothetical protein. | KEGG: aba:Acid345_2012 hypothetical protein. | 0.478 |
Acid_4928 | Acid_0106 | KEGG: aba:Acid345_2012 hypothetical protein. | KEGG: aba:Acid345_2515 putative anti-sigma regulatory factor, serine/threonine protein kinase. | 0.411 |
Acid_4928 | Acid_1844 | KEGG: aba:Acid345_2012 hypothetical protein. | KEGG: bat:BAS2535 hypothetical protein. | 0.439 |
Acid_4928 | Acid_1898 | KEGG: aba:Acid345_2012 hypothetical protein. | KEGG: gvi:gll4136 unknown protein. | 0.429 |
Acid_4928 | Acid_2036 | KEGG: aba:Acid345_2012 hypothetical protein. | KEGG: ani:AN3569.2 hypothetical protein. | 0.466 |
Acid_4928 | Acid_4617 | KEGG: aba:Acid345_2012 hypothetical protein. | KEGG: aba:Acid345_4433 hypothetical protein. | 0.478 |
Acid_4928 | Acid_4929 | KEGG: aba:Acid345_2012 hypothetical protein. | Hypothetical protein. | 0.682 |
Acid_4928 | Acid_4930 | KEGG: aba:Acid345_2012 hypothetical protein. | Hypothetical protein. | 0.594 |
Acid_4928 | Acid_4931 | KEGG: aba:Acid345_2012 hypothetical protein. | KEGG: aba:Acid345_3858 hypothetical protein. | 0.414 |
Acid_4928 | Acid_5728 | KEGG: aba:Acid345_2012 hypothetical protein. | PFAM: hydroxymethylglutaryl-coenzyme A reductase; KEGG: sru:SRU_2422 hydroxymethylglutaryl-coenzyme A reductase. | 0.570 |
Acid_4929 | Acid_4928 | Hypothetical protein. | KEGG: aba:Acid345_2012 hypothetical protein. | 0.682 |
Acid_4929 | Acid_4930 | Hypothetical protein. | Hypothetical protein. | 0.671 |
Acid_4929 | Acid_4931 | Hypothetical protein. | KEGG: aba:Acid345_3858 hypothetical protein. | 0.461 |
Acid_4930 | Acid_4928 | Hypothetical protein. | KEGG: aba:Acid345_2012 hypothetical protein. | 0.594 |
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