Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_4932PFAM: FAD dependent oxidoreductase; KEGG: sma:SAV1789 sarcosine oxidase subunit beta. (385 aa)    
Predicted Functional Partners:
gcvT
Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine.
 
 
 0.974
Acid_3883
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: ttj:TTHA1835 NADH oxidase.
  
 0.875
Acid_6579
PFAM: proline racemase; KEGG: xac:XAC2231 B-cell mitogen related protein.
 
   
 0.639
Acid_4810
PFAM: short-chain dehydrogenase/reductase SDR; MaoC domain protein dehydratase; KEGG: pfo:Pfl_0654 MaoC-like dehydratase.
    
 0.510
Acid_0481
Glycine dehydrogenase (decarboxylating) beta subunit; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; glycine cleavage system P-protein; KEGG: aba:Acid345_2458 glycine dehydrogenase (decarboxylating).
   
 
 0.500
gcvPA
Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
   
 
 0.487
Acid_2515
PFAM: aminotransferase, class V; KEGG: aba:Acid345_0127 alanine--glyoxylate transaminase.
 
 
 0.487
thiG
Thiazole biosynthesis family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
  
 0.473
Acid_2302
PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: mmu:12971 crystallin, mu.
 
  
 0.471
Acid_0108
TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: gme:Gmet_2933 ThiS, thiamine-biosynthesis.
  
  
 0.463
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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