Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_4941Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: syf:Synpcc7942_2180 bacterioferritin comigratory protein. (151 aa)    
Predicted Functional Partners:
Acid_4940
Hypothetical protein; KEGG: rso:RS05070 putative hemagglutinin/hemolysin-related protein.
       0.773
thiE
Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
       0.732
Acid_4943
PFAM: amino acid permease-associated region; KEGG: aba:Acid345_3285 amino acid transporter.
       0.732
Acid_4944
PFAM: amino acid permease-associated region; KEGG: bfr:BF0679 cationic amino acid transporter.
       0.732
Acid_4945
Hypothetical protein.
       0.547
Acid_5230
Cobyrinic acid a,c-diamide synthase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.490
Acid_1562
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: aba:Acid345_2212 thioredoxin-like.
  
     0.476
Acid_4939
PFAM: protein of unknown function DUF124; KEGG: mxa:MXAN_0412 conserved hypothetical protein TIGR00266.
       0.476
Acid_1451
PFAM: glutathione peroxidase; Redoxin domain protein; KEGG: sth:STH1733 cytochrome c biogenesis protein.
  
     0.451
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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