Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
Acid_4944PFAM: amino acid permease-associated region; KEGG: bfr:BF0679 cationic amino acid transporter. (479 aa)    
Predicted Functional Partners:
Acid_4943
PFAM: amino acid permease-associated region; KEGG: aba:Acid345_3285 amino acid transporter.
 
    
0.850
thiE
Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
     
 0.815
Acid_4940
Hypothetical protein; KEGG: rso:RS05070 putative hemagglutinin/hemolysin-related protein.
       0.732
Acid_4941
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: syf:Synpcc7942_2180 bacterioferritin comigratory protein.
       0.732
Acid_1835
PFAM: amino acid permease-associated region; KEGG: aba:Acid345_1536 amino acid transporter.
  
     0.715
Acid_4945
Hypothetical protein.
       0.576
Acid_4939
PFAM: protein of unknown function DUF124; KEGG: mxa:MXAN_0412 conserved hypothetical protein TIGR00266.
       0.454
Acid_2296
PFAM: amino acid permease-associated region; KEGG: aba:Acid345_1536 amino acid transporter.
  
     0.417
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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