Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Acid_4968PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: aba:Acid345_4276 peptidase M1, membrane alanine aminopeptidase. (798 aa)    
Predicted Functional Partners:
Acid_4969
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: aba:Acid345_4309 short-chain dehydrogenase/reductase SDR.
   
   0.731
Acid_6965
KEGG: cya:CYA_2409 hypothetical protein.
  
 
  0.706
Acid_4940
Hypothetical protein; KEGG: rso:RS05070 putative hemagglutinin/hemolysin-related protein.
  
     0.649
Acid_3523
Hypothetical protein; KEGG: aba:Acid345_2388 Cna B-type protein.
  
     0.646
Acid_3368
Hypothetical protein; KEGG: aba:Acid345_1501 TonB-dependent receptor.
  
     0.634
Acid_3977
KEGG: aba:Acid345_0428 hypothetical protein.
  
     0.633
Acid_2840
Hypothetical protein; KEGG: aba:Acid345_0663 TonB-dependent receptor.
  
     0.595
Acid_0894
KEGG: syn:slr1753 hypothetical protein.
  
     0.594
Acid_1591
Hypothetical protein; KEGG: aba:Acid345_0933 Cna B-type protein.
  
     0.588
Acid_5869
PFAM: TonB-dependent receptor, plug; KEGG: aba:Acid345_0663 TonB-dependent receptor.
  
     0.584
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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