Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_4971KEGG: hch:HCH_00492 hypothetical protein. (203 aa)    
Predicted Functional Partners:
Acid_3484
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: aba:Acid345_1683 tetratricopeptide repeat protein.
 
     0.730
Acid_6158
KEGG: aba:Acid345_0445 hypothetical protein.
  
     0.689
Acid_3492
KEGG: aba:Acid345_0900 hypothetical protein.
  
     0.664
Acid_1773
PFAM: Cna B domain protein; KEGG: aba:Acid345_0900 hypothetical protein.
  
     0.663
Acid_3930
PFAM: Calcium-binding EF-hand-containing protein; KEGG: sco:SCO6572 glycosyl hydrolase (secreted protein).
  
     0.650
Acid_1990
KEGG: aba:Acid345_0918 Cna B-type protein.
  
     0.641
Acid_0593
PFAM: FG-GAP repeat protein; KEGG: ani:AN5280.2 hypothetical protein.
  
     0.621
Acid_5921
KEGG: aba:Acid345_1678 hypothetical protein.
  
     0.618
Acid_6137
Hypothetical protein; KEGG: aba:Acid345_0918 Cna B-type protein.
  
     0.563
Acid_6139
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rba:RB12844 hypothetical protein.
  
     0.557
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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