Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_5007Conserved hypothetical protein; KEGG: bcl:ABC1419 transposase, IS493 family. (259 aa)    
Predicted Functional Partners:
Acid_5276
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aba:Acid345_3435 glyoxalase/bleomycin resistance protein/dioxygenase.
  
     0.756
Acid_5006
PFAM: glycoside hydrolase, family 3 domain protein; KEGG: sma:SAV2708 putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 3 family.
       0.723
Acid_5008
KEGG: aba:Acid345_2353 hypothetical protein.
       0.590
Acid_5009
PFAM: beta-lactamase; KEGG: rpd:RPD_0253 beta-lactamase.
       0.547
Acid_5262
KEGG: nfa:nfa20700 hypothetical protein.
  
     0.488
Acid_6750
PFAM: ThiJ/PfpI domain protein; KEGG: bcz:BCZK2399 ThiJ/PfpI family protein.
 
    0.473
Acid_6973
PFAM: carbon starvation protein CstA; KEGG: aba:Acid345_3619 carbon starvation protein CstA.
  
    0.461
Acid_5010
PFAM: Pyrrolo-quinoline quinone; cytochrome c, class I; KEGG: bja:blr6207 probable quinoprotein ethanol dehydrogenase precursor.
       0.410
Acid_0395
Transcriptional regulator, Fis family; PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: bcl:ABC1420 hypothetical protein.
 
    0.400
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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