STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_5010PFAM: Pyrrolo-quinoline quinone; cytochrome c, class I; KEGG: bja:blr6207 probable quinoprotein ethanol dehydrogenase precursor. (597 aa)    
Predicted Functional Partners:
Acid_3883
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: ttj:TTHA1835 NADH oxidase.
   
 
 0.864
Acid_7814
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: sme:SMb20179 hypothetical protein.
 
    0.783
Acid_3507
PFAM: cytochrome c oxidase, subunit I; KEGG: pcu:pc1978 putative cytochrome-c oxidase fixN chain.
  
 
 0.775
Acid_3506
Monoheme cytochrome SoxX (sulfur oxidation); KEGG: gme:Gmet_2122 cytochrome c, class I.
  
 
 0.773
Acid_6208
PFAM: cytochrome c, class I; Cytochrome b/b6, N-terminal domain; KEGG: gsu:GSU1649 cytochrome b/b6.
  
 
 0.773
Acid_6911
SMART: extracellular solute-binding protein, family 3; KEGG: xcb:XC_0683 MoxJ protein.
 
 
 0.765
Acid_3334
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mma:MM0214 hypothetical protein.
 
    0.732
Acid_0669
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mba:Mbar_A3461 hypothetical protein.
 
    0.720
Acid_5088
PFAM: aldehyde dehydrogenase; KEGG: noc:Noc_1710 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.681
Acid_6729
PFAM: aldehyde dehydrogenase; KEGG: aba:Acid345_1381 aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
   
 
 0.681
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.