Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Knowledge-based Evidence
from curated databases
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Acid_5014PFAM: peptidase M52, hydrogen uptake protein; KEGG: aba:Acid345_1555 peptidase M52, hydrogen uptake protein. (154 aa)    
Predicted Functional Partners:
Acid_5016
PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: dps:DP2211 hydrogenase, small chain.
 
  
 0.963
Acid_5015
PFAM: nickel-dependent hydrogenase, large subunit; KEGG: dps:DP2212 hydrogenase, large chain.
 
  
 0.962
Acid_5017
Hydrogen dehydrogenase; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: dps:DP2210 probable hydrogenase, chain U.
 
   
 0.942
Acid_5019
PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; KEGG: dps:DP2208 probable NADH dehydrogenase (ubiquinone) I, chain E.
 
   
 0.924
Acid_5018
PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: dps:DP2209 probable NADH dehydrogenase (ubiquinone) I, chain F.
 
   
 0.909
Acid_6995
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate.
 
     0.692
gpmA
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
    
   0.689
Acid_6996
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: aba:Acid345_0730 pyruvate--ferredoxin (flavodoxin) oxidoreductase.
 
   
 0.571
Acid_6556
Hydrogen:quinone oxidoreductase; PFAM: nickel-dependent hydrogenase, large subunit; KEGG: sma:SAV7367 putative cytochrome C3-like hydrogenase (NiFeSe) large chain.
  
 
 0.420
Acid_6926
PFAM: nickel-dependent hydrogenase, large subunit; KEGG: aba:Acid345_4240 nickel-dependent hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
  
 
 0.420
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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