Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Acid_1972 | Acid_5387 | PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; 2-nitropropane dioxygenase, NPD; KR; KEGG: fra:Francci3_0926 beta-ketoacyl synthase. | PFAM: sulfatase. | 0.420 |
Acid_5386 | Acid_5387 | PFAM: Methyltransferase type 12; KEGG: sme:SMa0773 NoeA host specific nodulation protein. | PFAM: sulfatase. | 0.777 |
Acid_5386 | Acid_5388 | PFAM: Methyltransferase type 12; KEGG: sme:SMa0773 NoeA host specific nodulation protein. | PFAM: Peptidoglycan-binding domain 1 protein; KEGG: cps:CPS_2656 CHAP domain protein. | 0.721 |
Acid_5387 | Acid_1972 | PFAM: sulfatase. | PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; 2-nitropropane dioxygenase, NPD; KR; KEGG: fra:Francci3_0926 beta-ketoacyl synthase. | 0.420 |
Acid_5387 | Acid_5386 | PFAM: sulfatase. | PFAM: Methyltransferase type 12; KEGG: sme:SMa0773 NoeA host specific nodulation protein. | 0.777 |
Acid_5387 | Acid_5388 | PFAM: sulfatase. | PFAM: Peptidoglycan-binding domain 1 protein; KEGG: cps:CPS_2656 CHAP domain protein. | 0.714 |
Acid_5388 | Acid_5386 | PFAM: Peptidoglycan-binding domain 1 protein; KEGG: cps:CPS_2656 CHAP domain protein. | PFAM: Methyltransferase type 12; KEGG: sme:SMa0773 NoeA host specific nodulation protein. | 0.721 |
Acid_5388 | Acid_5387 | PFAM: Peptidoglycan-binding domain 1 protein; KEGG: cps:CPS_2656 CHAP domain protein. | PFAM: sulfatase. | 0.714 |