STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_5438PFAM: Curli production assembly/transport component CsgG; KEGG: aba:Acid345_2162 curli production assembly/transport component CsgG. (324 aa)    
Predicted Functional Partners:
Acid_2770
KEGG: aba:Acid345_3052 tetratricopeptide repeat protein.
  
    0.818
Acid_4745
PFAM: O-antigen polymerase; KEGG: sth:STH1100 hypothetical protein.
  
   
 0.605
Acid_5439
Hypothetical protein.
       0.538
Acid_5434
Tungstate/molybdate transport system ATP-binding protein; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ade:Adeh_0998 molybdate ABC transporter, ATPase subunit.
       0.537
Acid_5435
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
       0.524
Acid_5436
TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: ade:Adeh_1000 molybdenum ABC transporter, periplasmic molybdate-binding protein.
       0.524
Acid_5437
KEGG: aba:Acid345_4542 hypothetical protein.
       0.524
Acid_4123
PFAM: O-antigen polymerase; KEGG: dps:DPPB82 related to polysaccharide transport proteins.
  
   
 0.506
Acid_6485
Multidrug resistance efflux pump-like protein; KEGG: dvu:DVU2439 efflux transporter, RND family, MFP subunit.
  
 
   0.441
Acid_7234
KEGG: dde:Dde_0840 hypothetical protein.
  
 
   0.439
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.