STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_5608PFAM: Heavy metal transport/detoxification protein; KEGG: bxe:Bxe_B2938 copper-translocating P-type ATPase. (71 aa)    
Predicted Functional Partners:
Acid_5609
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: mxa:MXAN_3422 copper-translocating P-type ATPase.
 
 
0.990
Acid_0141
Superoxide dismutase, copper/zinc binding; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 0.979
Acid_3513
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: ade:Adeh_1177 copper-translocating P-type ATPase.
 
 
 0.969
Acid_5607
KEGG: deh:cbdb_A1264 acetyltransferase, GNAT family.
     
 0.588
rplN
LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.582
Acid_0097
Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; KEGG: aba:Acid345_0210 transcriptional repressor, CopY family.
  
  
 0.493
Acid_0898
Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; KEGG: aba:Acid345_0210 transcriptional repressor, CopY family.
  
  
 0.493
Acid_1031
PFAM: Penicillinase repressor; KEGG: gvi:glr2977 MarR family transcriptional regulatory protein.
  
  
 0.493
Acid_1488
Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; KEGG: aba:Acid345_2853 transcriptional repressor, CopY family.
  
  
 0.493
Acid_2643
Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; KEGG: aba:Acid345_0210 transcriptional repressor, CopY family.
  
  
 0.493
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.