STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_5990PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gme:Gmet_0657 ABC transporter-related protein. (311 aa)    
Predicted Functional Partners:
Acid_5991
PFAM: ABC-2 type transporter; KEGG: gsu:GSU2825 membrane protein, putative.
  
 0.996
Acid_5992
PFAM: ABC-2 type transporter; KEGG: gme:Gmet_3460 ABC-2.
  
 0.996
Acid_5988
PFAM: secretion protein HlyD family protein; KEGG: gme:Gmet_3464 secretion protein HlyD.
    0.952
Acid_1494
PFAM: ABC-2 type transporter; KEGG: aba:Acid345_3063 ABC multidrug efflux pump, inner membrane subunit.
 
  
 0.816
Acid_5989
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gme:Gmet_0658 ABC transporter-related protein.
 
    
0.801
Acid_5986
PFAM: regulatory protein, TetR; KEGG: eba:c1A220 transcriptional regulator, TetR family.
       0.773
Acid_5987
PFAM: outer membrane efflux protein; KEGG: aba:Acid345_3096 outer membrane efflux protein.
       0.773
Acid_4516
PFAM: ABC-2 type transporter; KEGG: tte:TTE2144 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 
 0.621
Acid_0603
PFAM: ABC-2 type transporter; KEGG: mma:MM3136 ABC transporter, permease protein.
  
 0.618
Acid_6716
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV3608 putative ABC transporter ATP-binding protein.
 
   
0.595
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.