STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_6131PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: gvi:gll1483 probable methyltransferase. (298 aa)    
Predicted Functional Partners:
Acid_6132
PFAM: hydroxymethylglutaryl-coenzyme A reductase; KEGG: sru:SRU_2422 hydroxymethylglutaryl-coenzyme A reductase.
       0.682
Acid_3776
Methyltransferase type 11; PFAM: methyltransferase small; thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ava:Ava_0823 cyclopropane-fatty-acyl-phospholipid synthase.
 
   
 0.542
Acid_4410
Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpd:RPD_3422 methyltransferase type 11.
  
     0.504
Acid_5521
Methyltransferase type 11; PFAM: putative methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: mbo:Mb2976 possible methyltransferase (methylase).
  
     0.502
Acid_3267
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mlo:mlr6936 sarcosine-dimethylglycine methyltransferase.
  
     0.462
Acid_3173
Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: aba:Acid345_1114 UbiE/COQ5 methyltransferase.
  
     0.457
Acid_0008
Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mca:MCA3003 methyltransferase, UbiE/COQ5 family.
  
     0.451
Acid_2472
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: aba:Acid345_1114 UbiE/COQ5 methyltransferase.
  
     0.442
Acid_6130
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: gvi:gll1854 two-component sensor histidine kinase.
       0.439
Acid_4276
Methyltransferase type 11; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: aba:Acid345_0672 putative RNA methylase.
  
     0.438
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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