STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_6250PFAM: putative esterase; KEGG: mxa:MXAN_0566 hydrolase. (240 aa)    
Predicted Functional Partners:
Acid_6251
PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: ava:Ava_0462 peptidase S9, prolyl oligopeptidase active site region.
       0.671
Acid_1775
PFAM: putative esterase; KEGG: bur:Bcep18194_A5450 putative esterase.
  
     0.602
Acid_3700
KEGG: bce:BC0867 hypothetical protein.
  
     0.582
Acid_7597
Beta-galactosidase; PFAM: Glycoside hydrolase, family 42, N-terminal domain protein; Beta-galactosidase trimerisation domain protein; KEGG: sma:SAV1325 putative beta-galactosidase.
  
     0.514
Acid_7648
KEGG: ape:APE0340 hypothetical protein.
  
     0.490
Acid_6252
PFAM: protein of unknown function DUF214; KEGG: gvi:glr1418 putative ABC transport system permease protein.
  
    0.477
Acid_6268
Hypothetical protein.
  
     0.459
Acid_1918
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: aba:Acid345_4594 hypothetical protein.
  
     0.435
Acid_6389
PFAM: Lanthionine synthetase C family protein; KEGG: ava:Ava_B0238 lanthionine synthetase C-like.
  
     0.404
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.