Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Acid_1584 | Acid_6254 | Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | KEGG: lmf:LMOf2365_0117 hypothetical protein. | 0.716 |
Acid_6254 | Acid_1584 | KEGG: lmf:LMOf2365_0117 hypothetical protein. | Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | 0.716 |
Acid_6254 | Acid_6255 | KEGG: lmf:LMOf2365_0117 hypothetical protein. | PFAM: bifunctional deaminase-reductase domain protein; KEGG: sco:SCO2813 hypothetical protein. | 0.667 |
Acid_6254 | Acid_6256 | KEGG: lmf:LMOf2365_0117 hypothetical protein. | Hypothetical protein; KEGG: gvi:gll4200 similar to cell surface glycoprotein (s-layer protein) related protein. | 0.409 |
Acid_6255 | Acid_6254 | PFAM: bifunctional deaminase-reductase domain protein; KEGG: sco:SCO2813 hypothetical protein. | KEGG: lmf:LMOf2365_0117 hypothetical protein. | 0.667 |
Acid_6255 | Acid_6256 | PFAM: bifunctional deaminase-reductase domain protein; KEGG: sco:SCO2813 hypothetical protein. | Hypothetical protein; KEGG: gvi:gll4200 similar to cell surface glycoprotein (s-layer protein) related protein. | 0.479 |
Acid_6256 | Acid_6254 | Hypothetical protein; KEGG: gvi:gll4200 similar to cell surface glycoprotein (s-layer protein) related protein. | KEGG: lmf:LMOf2365_0117 hypothetical protein. | 0.409 |
Acid_6256 | Acid_6255 | Hypothetical protein; KEGG: gvi:gll4200 similar to cell surface glycoprotein (s-layer protein) related protein. | PFAM: bifunctional deaminase-reductase domain protein; KEGG: sco:SCO2813 hypothetical protein. | 0.479 |