STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_6462Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: pol:Bpro_4297 PAS/PAC sensor signal transduction histidine kinase. (449 aa)    
Predicted Functional Partners:
Acid_6461
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: gsu:GSU0682 DNA-binding response regulator, LuxR family.
 
 0.941
Acid_1603
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: rfr:Rfer_0894 two component transcriptional regulator, LuxR family.
 
 0.825
Acid_2793
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: aba:Acid345_4064 two component transcriptional regulator, LuxR family.
 
 0.825
Acid_2870
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: dsy:DSY4618 hypothetical protein.
 
 0.825
Acid_3481
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: aba:Acid345_1691 two component transcriptional regulator, LuxR family.
 
 0.825
Acid_7866
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: ade:Adeh_1997 two component transcriptional regulator, LuxR family.
 
 0.825
Acid_7878
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: aba:Acid345_4290 two component transcriptional regulator, LuxR family.
 
 0.825
Acid_1406
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: aba:Acid345_3502 two component transcriptional regulator, LuxR family.
 
 
 0.824
Acid_1755
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: aba:Acid345_0972 two component transcriptional regulator, LuxR family.
 
 0.824
Acid_2188
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: gvi:gll1683 two-component response regulator.
 
 0.824
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.