Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Acid_6527 | Acid_6528 | PFAM: TadE family protein; KEGG: nmu:Nmul_A2356 TadE-like. | PFAM: TadE family protein; KEGG: reu:Reut_A2654 TadE-like. | 0.773 |
Acid_6527 | Acid_6529 | PFAM: TadE family protein; KEGG: nmu:Nmul_A2356 TadE-like. | KEGG: reu:Reut_A2655 hypothetical protein. | 0.773 |
Acid_6527 | Acid_6530 | PFAM: TadE family protein; KEGG: nmu:Nmul_A2356 TadE-like. | Hypothetical protein. | 0.495 |
Acid_6528 | Acid_6527 | PFAM: TadE family protein; KEGG: reu:Reut_A2654 TadE-like. | PFAM: TadE family protein; KEGG: nmu:Nmul_A2356 TadE-like. | 0.773 |
Acid_6528 | Acid_6529 | PFAM: TadE family protein; KEGG: reu:Reut_A2654 TadE-like. | KEGG: reu:Reut_A2655 hypothetical protein. | 0.773 |
Acid_6528 | Acid_6530 | PFAM: TadE family protein; KEGG: reu:Reut_A2654 TadE-like. | Hypothetical protein. | 0.495 |
Acid_6529 | Acid_6527 | KEGG: reu:Reut_A2655 hypothetical protein. | PFAM: TadE family protein; KEGG: nmu:Nmul_A2356 TadE-like. | 0.773 |
Acid_6529 | Acid_6528 | KEGG: reu:Reut_A2655 hypothetical protein. | PFAM: TadE family protein; KEGG: reu:Reut_A2654 TadE-like. | 0.773 |
Acid_6529 | Acid_6530 | KEGG: reu:Reut_A2655 hypothetical protein. | Hypothetical protein. | 0.495 |
Acid_6530 | Acid_6527 | Hypothetical protein. | PFAM: TadE family protein; KEGG: nmu:Nmul_A2356 TadE-like. | 0.495 |
Acid_6530 | Acid_6528 | Hypothetical protein. | PFAM: TadE family protein; KEGG: reu:Reut_A2654 TadE-like. | 0.495 |
Acid_6530 | Acid_6529 | Hypothetical protein. | KEGG: reu:Reut_A2655 hypothetical protein. | 0.495 |
Acid_6530 | Acid_6531 | Hypothetical protein. | PFAM: Carboxylesterase, type B; KEGG: bja:bll4001 putative esterase; Belongs to the type-B carboxylesterase/lipase family. | 0.520 |
Acid_6531 | Acid_6530 | PFAM: Carboxylesterase, type B; KEGG: bja:bll4001 putative esterase; Belongs to the type-B carboxylesterase/lipase family. | Hypothetical protein. | 0.520 |