STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_6683Multidrug resistance efflux pump-like protein; KEGG: gvi:glr2030 similar to nickel-cobalt resistance protein. (441 aa)    
Predicted Functional Partners:
Acid_6684
Hypothetical protein.
       0.701
Acid_7569
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aba:Acid345_1700 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.680
Acid_6454
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dar:Daro_2253 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.656
Acid_6484
PFAM: protein of unknown function DUF214; KEGG: bba:Bd0709 macrolide specific ABC-type transporter, ATP-binding protein.
  
    0.648
Acid_5484
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aba:Acid345_0308 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.622
Acid_4101
PFAM: protein of unknown function DUF214; KEGG: bba:Bd0709 macrolide specific ABC-type transporter, ATP-binding protein.
  
    0.615
Acid_6681
PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: aba:Acid345_3252 cytochrome bd ubiquinol oxidase, subunit I.
 
     0.612
Acid_6682
TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: aba:Acid345_3251 cytochrome d ubiquinol oxidase, subunit II.
 
     0.605
Acid_5519
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mxa:MXAN_6178 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.588
Acid_5981
PFAM: protein of unknown function DUF214; KEGG: aba:Acid345_4376 ABC efflux pump, inner membrane subunit.
  
    0.576
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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