STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_6845FOG: Ankyrin repeat-like protein; KEGG: ani:AN1130.2 hypothetical protein. (732 aa)    
Predicted Functional Partners:
Acid_5018
PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: dps:DP2209 probable NADH dehydrogenase (ubiquinone) I, chain F.
   
 0.843
Acid_7343
Ankyrin; KEGG: dge:Dgeo_1884 ankyrin.
  
     0.773
Acid_0102
PFAM: Ankyrin; KEGG: mfa:Mfla_1887 ankyrin.
  
     0.768
Acid_1972
PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; 2-nitropropane dioxygenase, NPD; KR; KEGG: fra:Francci3_0926 beta-ketoacyl synthase.
   
 0.748
Acid_3757
PFAM: Ankyrin; KEGG: ani:AN1130.2 hypothetical protein.
  
     0.745
Acid_3519
PFAM: globin; Ankyrin; KEGG: sco:SCO2671 putative globin.
  
     0.731
Acid_0022
PFAM: Ankyrin; KEGG: aba:Acid345_2372 ankyrin.
  
     0.668
Acid_6270
PFAM: Ankyrin; KEGG: mba:Mbar_A2380 hypothetical protein.
  
     0.651
Acid_7192
PFAM: nuclear protein SET; SMART: SET-related domain protein; KEGG: cel:C26E6.9b Set (trithorax/polycomb) domain containing protein 2, isoform b.
  
 
 0.580
Acid_1440
Hypothetical protein.
    
 0.571
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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