STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_6934PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xac:XAC1459 ABC transporter ATP-binding protein. (605 aa)    
Predicted Functional Partners:
Acid_6935
KEGG: ade:Adeh_3184 glycosyltransferase 36.
  
  
 0.779
Acid_2000
KEGG: ade:Adeh_2155 hypothetical protein.
  
     0.511
Acid_1999
KEGG: ade:Adeh_2156 hypothetical protein.
 
     0.499
Acid_1972
PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; 2-nitropropane dioxygenase, NPD; KR; KEGG: fra:Francci3_0926 beta-ketoacyl synthase.
  
 0.457
Acid_6933
Hypothetical protein.
       0.451
Acid_7671
KEGG: aba:Acid345_1198 hypothetical protein.
  
     0.408
Acid_1602
PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: mca:MCA0908 ATPase, AAA family.
   
 0.400
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.