STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_6983KEGG: aba:Acid345_2490 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, NAD - binding; Semialdehyde dehydrogenase, dimerisation region; Belongs to the aspartate-semialdehyde dehydrogenase family. (349 aa)    
Predicted Functional Partners:
Acid_6982
KEGG: aba:Acid345_2491 aspartate kinase; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; Belongs to the aspartokinase family.
 
 0.998
Acid_0052
KEGG: mja:MJ0571 aspartate kinase; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; Belongs to the aspartokinase family.
 
 0.995
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
 
 
 0.978
Acid_0526
PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase, NAD-binding; KEGG: mca:MCA0597 homoserine dehydrogenase.
  
 0.954
Acid_7030
PFAM: homoserine dehydrogenase; homoserine dehydrogenase, NAD-binding; KEGG: ade:Adeh_3931 homoserine dehydrogenase.
  
 0.954
Acid_7181
PFAM: dihydrodipicolinate synthetase; KEGG: bcl:ABC0222 dihydrodipicolinate synthase; Belongs to the DapA family.
 
 
 0.950
Acid_3645
PFAM: dihydrodipicolinate synthetase; KEGG: rsp:RSP_3456 putative dihydrodipicolinate synthase; Belongs to the DapA family.
 
 
 0.948
Acid_2258
PFAM: dihydrodipicolinate synthetase; KEGG: rba:RB4605 dihydrodipicolinate synthase.
 
 
 0.947
Acid_6981
PFAM: dihydrodipicolinate reductase; KEGG: aba:Acid345_2492 dihydrodipicolinate reductase; Belongs to the DapB family.
 
  
 0.947
Acid_2446
PFAM: dihydrodipicolinate synthetase; KEGG: jan:Jann_4114 dihydrodipicolinate synthetase.
 
 
 0.946
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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