STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_7277TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: ldb:Ldb1792 UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (307 aa)    
Predicted Functional Partners:
Acid_4361
KEGG: aba:Acid345_0343 galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: histidine triad (HIT) protein.
  
 0.987
Acid_7827
UTP-hexose-1-phosphate uridylyltransferase / UDP-glucose-hexose-1-phosphate uridylyltransferase; KEGG: aba:Acid345_1703 galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein.
  
 0.987
Acid_7362
UDP-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase; KEGG: mta:Moth_1369 UTP-glucose-1-phosphate uridylyltransferase.
  
 0.959
Acid_1043
UDP-glucose pyrophosphorylase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: aba:Acid345_4550 UTP-glucose-1-phosphate uridylyltransferase.
  
 0.953
Acid_6549
PFAM: Nucleotidyl transferase; KEGG: rba:RB9094 UTP--glucose-1-phosphate uridylyltransferase.
 
  
 0.949
Acid_0574
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: lip:LIC023 nucleoside-diphosphate-sugar epimerases.
 
0.927
Acid_1458
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
  
 0.926
Acid_5906
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KR; KEGG: chy:CHY_1057 hypothetical protein.
 
0.926
Acid_0622
PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: pfu:PF1355 UDP-glucose dehydrogenase.
  
 
 0.925
Acid_6697
PFAM: UDP-glucose/GDP-mannose dehydrogenase; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; KEGG: syc:syc0570_d UDP-glucose dehydrogenase.
  
 
 0.925
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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