STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_7352Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: mxa:MXAN_5184 sensor histidine kinase. (460 aa)    
Predicted Functional Partners:
Acid_7351
Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: gme:Gmet_0776 two component, sigma54 specific, transcriptional regulator, fis family.
 
 0.979
Acid_3413
Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: aba:Acid345_1394 two component, sigma54 specific, transcriptional regulator, fis family.
 
 0.959
Acid_7873
Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: aba:Acid345_1734 two component, sigma54 specific, transcriptional regulator, fis family.
 
 0.951
Acid_6041
PFAM: response regulator receiver; KEGG: cps:CPS_1939 sensory box sensor histidine kinase/response regulator.
 
 
 0.739
Acid_1102
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: aba:Acid345_3062 periplasmic sensor signal transduction histidine kinase.
  
 
 
 0.729
Acid_5640
PFAM: response regulator receiver; KEGG: sth:STH2398 two-component hybrid sensor and regulator.
  
 
 
 0.728
Acid_1851
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE2 domain protein; KEGG: sth:STH749 two-component sensor kinase, probably involved in phosphate sensing.
  
   
 0.725
Acid_7353
Hypothetical protein.
       0.723
Acid_1442
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: gme:Gmet_3478 PAS/PAC sensor signal transduction histidine kinase.
  
 
 
 0.715
Acid_5125
PFAM: response regulator receiver; KEGG: nar:Saro_1287 response regulator receiver domain protein (CheY-like).
 
 
 0.714
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.