STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_7523PFAM: peptidase M16 domain protein; KEGG: ana:all1939 processing proteinase. (479 aa)    
Predicted Functional Partners:
Acid_7524
PFAM: peptidase M16 domain protein; KEGG: aba:Acid345_0622 peptidase M16-like.
    
0.984
Acid_7580
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.979
Acid_5018
PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: dps:DP2209 probable NADH dehydrogenase (ubiquinone) I, chain F.
   
 
 0.977
Acid_2148
PFAM: peptidase M16 domain protein; KEGG: mxa:MXAN_0791 peptidase, M16 (pitrilysin) family.
 
    
0.930
Acid_0504
PFAM: peptidase M16 domain protein; KEGG: fra:Francci3_3796 peptidase M16-like.
 
    
0.925
Acid_0497
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.870
Acid_6909
PFAM: cytochrome c oxidase, subunit II; cytochrome c, class I; KEGG: mlo:mll9631 cytochrome oxidase subunit II.
  
 0.870
Acid_6418
PFAM: peptidase M16 domain protein; KEGG: aba:Acid345_0622 peptidase M16-like.
    
0.866
Acid_7525
PFAM: protein of unknown function DUF1080; KEGG: aba:Acid345_2324 protein of unknown function DUF1080.
  
    0.743
Acid_7526
Hypothetical protein.
       0.741
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.