STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_7545PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: sat:SYN_00084 multimeric flavodoxin. (187 aa)    
Predicted Functional Partners:
Acid_2180
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mac:MA3655 UbiE/COQ5 methyltransferase.
  
  
  0.911
Acid_2706
PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: gme:Gmet_1167 ubiquinone/menaquinone biosynthesis methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. MenG/UbiE family.
     
  0.900
menG
Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
     
  0.900
Acid_2709
Hypothetical protein; KEGG: aba:Acid345_2692 chromosome segregation ATPases-like.
   
  
 0.808
Acid_3429
PFAM: Peptidoglycan-binding LysM; KEGG: sdy:SDY_2855 hypothetical protein.
   
  
 0.656
Acid_4897
PFAM: Peptidoglycan-binding LysM; KEGG: LysM domain protein.
   
  
 0.656
Acid_3434
Catalase domain protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
  
  
 0.650
Acid_7544
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: aba:Acid345_0895 NAD-dependent epimerase/dehydratase.
  
    0.649
Acid_7543
Periplasmic component of the Tol biopolymer transport system-like protein; KEGG: sme:SMc00162 hypothetical protein.
       0.508
Acid_3864
TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase, central region; KEGG: gvi:glr2297 transketolase; Belongs to the transketolase family.
 
  
 0.505
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.