STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_7575KEGG: ava:Ava_2768 hypothetical protein. (882 aa)    
Predicted Functional Partners:
Acid_7576
NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: gsu:GSU0493 pyridine nucleotide-disulphide oxidoreductase family protein.
  
    0.728
Acid_0409
KEGG: cya:CYA_2127 alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylases; PFAM: glycosyl transferase, family 35.
  
 
 0.707
Acid_7578
PFAM: glucose-methanol-choline oxidoreductase; KEGG: sma:SAV1930 choline dehydrogenase.
  
    0.700
Acid_7577
Glucose 1-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: syf:Synpcc7942_1573 3-oxoacyl-(acyl-carrier protein) reductase.
       0.684
Acid_7579
PFAM: major facilitator superfamily MFS_1; KEGG: dra:DR1971 hypothetical protein.
       0.684
Acid_7580
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
       0.532
Acid_7581
Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
       0.518
Acid_7582
PFAM: cytochrome c oxidase, subunit III; KEGG: gvi:gll2162 cytochrome c oxidase subunit III.
       0.508
Acid_7583
Hypothetical protein.
       0.490
Acid_7584
PFAM: cytochrome c, class I; KEGG: tbd:Tbd_2545 putative cytochrome c.
       0.490
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.