STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acid_7894PFAM: cytochrome c, class I. (366 aa)    
Predicted Functional Partners:
Acid_6208
PFAM: cytochrome c, class I; Cytochrome b/b6, N-terminal domain; KEGG: gsu:GSU1649 cytochrome b/b6.
  
 
 0.956
Acid_3506
Monoheme cytochrome SoxX (sulfur oxidation); KEGG: gme:Gmet_2122 cytochrome c, class I.
  
 
 0.917
Acid_7580
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.892
Acid_0497
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.855
Acid_6909
PFAM: cytochrome c oxidase, subunit II; cytochrome c, class I; KEGG: mlo:mll9631 cytochrome oxidase subunit II.
  
 
 0.855
Acid_1741
PFAM: cytochrome c, class I.
   
 
0.830
Acid_0490
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: aba:Acid345_3003 Fe-S-cluster-containing hydrogenase.
  
 
 0.824
Acid_7896
TIGRFAM: cytochrome C family protein; KEGG: aba:Acid345_3828 multiheme cytochrome.
  
  
 0.775
Acid_7895
KEGG: aba:Acid345_3827 hypothetical protein.
       0.768
Acid_7897
KEGG: gme:Gmet_0910 hypothetical protein.
     
 0.717
Your Current Organism:
Solibacter usitatus
NCBI taxonomy Id: 234267
Other names: Acidobacteriaceae bacterium Ellin6076, Acidobacterium sp. Ellin6076, C. Solibacter usitatus Ellin6076, Candidatus Solibacter usitatus Ellin6076, Solibacter usitatus Ellin6076, bacterium Ellin6076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.