STRINGSTRING
RER_02740 protein (Rhodococcus erythropolis) - STRING interaction network
"RER_02740" - Hypothetical protein in Rhodococcus erythropolis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RER_02740Hypothetical protein (323 aa)    
Predicted Functional Partners:
RER_13020
Hypothetical protein (352 aa)
   
          0.775
mce2A
Mce family protein (407 aa)
   
          0.660
mce2D
Mce family protein (365 aa)
   
          0.624
RER_02730
Hypothetical protein (164 aa)
              0.621
RER_50640
Hypothetical protein (331 aa)
   
          0.575
RER_15890
Heparin-binding hemagglutinin (275 aa)
   
          0.574
RER_49090
Hypothetical protein (348 aa)
   
          0.571
mce2C
Mce family protein (338 aa)
   
          0.569
mce2E
Mce family protein (354 aa)
   
          0.563
RER_34700
Hypothetical protein (619 aa)
   
          0.560
Your Current Organism:
Rhodococcus erythropolis
NCBI taxonomy Id: 234621
Other names: Arthrobacter hydrocarboglutamicus, Arthrobacter oxamicetus, Arthrobacter oxamicetus subsp. propiophenicolus, Arthrobacter paraffineus, Arthrobacter picolinophilus, Brevibacterium healii, Brevibacterium ketoglutamicum, Brevibacterium paraffinoliticum, Corynebacterium alkanum, Corynebacterium aurantiacum, Corynebacterium humiferum, Corynebacterium sp. WS2071, Corynebacterium sp. WS2072, Mycobacterium erythropolis, Nocardia calcarea, Nocardioides simplex ATCC 13260, Nocardioides simplex ATCC 19565, Nocardioides simplex ATCC 19566, R. erythropolis, R. erythropolis PR4, Rhodococcus NI86/21, Rhodococcus erythreus, Rhodococcus erythropolis, Rhodococcus erythropolis (strain PR4), Rhodococcus erythropolis MBIC01337, Rhodococcus erythropolis NBRC 100887, Rhodococcus erythropolis PR4, Rhodococcus erythropolis str. PR4, Rhodococcus erythropolis strain PR4, Rhodococcus sp. (strain NI86/21), Rhodococcus sp. ATCC 15108, Rhodococcus sp. ATCC 15961, Rhodococcus sp. ATCC 21035, Rhodococcus sp. NCIB 9646, Rhodococcus sp. NI86/21, Rhodococcus sp. strain NI86/21
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