Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH55008.1 | SEH80940.1 | BAZSYMB_V2SCAFFOLD00045_6 | BAZSYMB_SCAFFOLD00012_4 | Iron-sulfur cluster-binding protein. | Fe-S-cluster-containing hydrogenase subunit. | 0.871 |
SEH55008.1 | SEH82705.1 | BAZSYMB_V2SCAFFOLD00045_6 | BAZSYMB_SCAFFOLD00002_53 | Iron-sulfur cluster-binding protein. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.452 |
SEH55008.1 | SEH88052.1 | BAZSYMB_V2SCAFFOLD00045_6 | BAZSYMB_SCAFFOLD00030_0 | Iron-sulfur cluster-binding protein. | Large subunit of NADH-dependent glutamatesynthase. | 0.957 |
SEH55008.1 | SEH88768.1 | BAZSYMB_V2SCAFFOLD00045_6 | BAZSYMB_GCONTIG00643_0 | Iron-sulfur cluster-binding protein. | Molybdopterin oxidoreductase. | 0.952 |
SEH57336.1 | SEH80926.1 | BAZSYMB_SCAFFOLD00004_20 | BAZSYMB_SCAFFOLD00012_3 | Sulfur oxidation protein SoxX. | Molybdopterin oxidoreductase. | 0.911 |
SEH57336.1 | SEH80940.1 | BAZSYMB_SCAFFOLD00004_20 | BAZSYMB_SCAFFOLD00012_4 | Sulfur oxidation protein SoxX. | Fe-S-cluster-containing hydrogenase subunit. | 0.911 |
SEH57336.1 | SEH82705.1 | BAZSYMB_SCAFFOLD00004_20 | BAZSYMB_SCAFFOLD00002_53 | Sulfur oxidation protein SoxX. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.847 |
SEH57336.1 | SEH88768.1 | BAZSYMB_SCAFFOLD00004_20 | BAZSYMB_GCONTIG00643_0 | Sulfur oxidation protein SoxX. | Molybdopterin oxidoreductase. | 0.891 |
SEH60380.1 | SEH73314.1 | BAZSYMB_SCAFFOLD00040_6 | BAZSYMB_SCAFFOLD00035_15 | Nitrite reductase [NAD(P)H] large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | [similarity to] nitrite reductase (NAD(P)H)small subunit. | 0.996 |
SEH60380.1 | SEH80940.1 | BAZSYMB_SCAFFOLD00040_6 | BAZSYMB_SCAFFOLD00012_4 | Nitrite reductase [NAD(P)H] large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Fe-S-cluster-containing hydrogenase subunit. | 0.639 |
SEH60380.1 | SEH82705.1 | BAZSYMB_SCAFFOLD00040_6 | BAZSYMB_SCAFFOLD00002_53 | Nitrite reductase [NAD(P)H] large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.725 |
SEH60380.1 | SEH88052.1 | BAZSYMB_SCAFFOLD00040_6 | BAZSYMB_SCAFFOLD00030_0 | Nitrite reductase [NAD(P)H] large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Large subunit of NADH-dependent glutamatesynthase. | 0.544 |
SEH60380.1 | SEH88768.1 | BAZSYMB_SCAFFOLD00040_6 | BAZSYMB_GCONTIG00643_0 | Nitrite reductase [NAD(P)H] large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Molybdopterin oxidoreductase. | 0.979 |
SEH70431.1 | SEH80926.1 | BAZSYMB_SCAFFOLD00023_8 | BAZSYMB_SCAFFOLD00012_3 | Cytochrome c, class I. | Molybdopterin oxidoreductase. | 0.829 |
SEH70431.1 | SEH80940.1 | BAZSYMB_SCAFFOLD00023_8 | BAZSYMB_SCAFFOLD00012_4 | Cytochrome c, class I. | Fe-S-cluster-containing hydrogenase subunit. | 0.834 |
SEH70431.1 | SEH82705.1 | BAZSYMB_SCAFFOLD00023_8 | BAZSYMB_SCAFFOLD00002_53 | Cytochrome c, class I. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.847 |
SEH70431.1 | SEH88768.1 | BAZSYMB_SCAFFOLD00023_8 | BAZSYMB_GCONTIG00643_0 | Cytochrome c, class I. | Molybdopterin oxidoreductase. | 0.903 |
SEH73314.1 | SEH60380.1 | BAZSYMB_SCAFFOLD00035_15 | BAZSYMB_SCAFFOLD00040_6 | [similarity to] nitrite reductase (NAD(P)H)small subunit. | Nitrite reductase [NAD(P)H] large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.996 |
SEH73314.1 | SEH80940.1 | BAZSYMB_SCAFFOLD00035_15 | BAZSYMB_SCAFFOLD00012_4 | [similarity to] nitrite reductase (NAD(P)H)small subunit. | Fe-S-cluster-containing hydrogenase subunit. | 0.639 |
SEH73314.1 | SEH82705.1 | BAZSYMB_SCAFFOLD00035_15 | BAZSYMB_SCAFFOLD00002_53 | [similarity to] nitrite reductase (NAD(P)H)small subunit. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.738 |
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