STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msbALipid transporter ATP-binding protein/permease; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (572 aa)    
Predicted Functional Partners:
SEH83180.1
Multidrug ABC transporter ATP-binding protein.
  
0.942
SEH74916.1
Tetratricopeptide TPR_1 repeat-containingprotein.
 
 
 0.941
SEH57609.1
Metal ABC transporter permease.
  
 
0.935
SEH95646.1
Tetratricopeptide repeat protein.
   
 0.925
SEH58546.1
Toxin transport protein.
  
 
 
0.898
SEH58580.1
Toxin RTX-I translocation ATP-binding protein.
  
 
 
0.898
SEH86040.1
Type I secretion system ATPase.
  
 
 
0.898
SEH86022.1
ABC transporter-like protein.
 
  
  0.874
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.815
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
 
   0.814
Your Current Organism:
Bathymodiolus azoricus
NCBI taxonomy Id: 235205
Other names: B. azoricus thioautotrophic gill symbiont, Bathymodiolus azoricus thioautotrophic gill symbiont
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