node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH85927.1 | SEH94433.1 | BAZSYMB_SCAFFOLD00010_2 | BAZSYMB_SCAFFOLD00024_5 | Ribonuclease D. | Exoribonuclease R; Belongs to the RNR ribonuclease family. | 0.901 |
SEH85927.1 | rplE | BAZSYMB_SCAFFOLD00010_2 | BAZSYMB_GORF58_GLIMMER3 | Ribonuclease D. | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.819 |
SEH85927.1 | rplJ | BAZSYMB_SCAFFOLD00010_2 | BAZSYMB_SCAFFOLD00004_14 | Ribonuclease D. | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.903 |
SEH85927.1 | rplV | BAZSYMB_SCAFFOLD00010_2 | BAZSYMB_GORF65_GLIMMER3 | Ribonuclease D. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.825 |
SEH85927.1 | rplW | BAZSYMB_SCAFFOLD00010_2 | BAZSYMB_GORF69_GLIMMER3 | Ribonuclease D. | 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.945 |
SEH85927.1 | rplX | BAZSYMB_SCAFFOLD00010_2 | BAZSYMB_GORF59_GLIMMER3 | Ribonuclease D. | 50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.924 |
SEH85927.1 | rpmC | BAZSYMB_SCAFFOLD00010_2 | BAZSYMB_GORF62_GLIMMER3 | Ribonuclease D. | 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.874 |
SEH88145.1 | SEH94433.1 | BAZSYMB_SCAFFOLD00030_5 | BAZSYMB_SCAFFOLD00024_5 | Thiamine monophosphate synthase; Belongs to the Nudix hydrolase family. | Exoribonuclease R; Belongs to the RNR ribonuclease family. | 0.894 |
SEH88145.1 | purA | BAZSYMB_SCAFFOLD00030_5 | BAZSYMB_SCAFFOLD00024_4 | Thiamine monophosphate synthase; Belongs to the Nudix hydrolase family. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.499 |
SEH94433.1 | SEH85927.1 | BAZSYMB_SCAFFOLD00024_5 | BAZSYMB_SCAFFOLD00010_2 | Exoribonuclease R; Belongs to the RNR ribonuclease family. | Ribonuclease D. | 0.901 |
SEH94433.1 | SEH88145.1 | BAZSYMB_SCAFFOLD00024_5 | BAZSYMB_SCAFFOLD00030_5 | Exoribonuclease R; Belongs to the RNR ribonuclease family. | Thiamine monophosphate synthase; Belongs to the Nudix hydrolase family. | 0.894 |
SEH94433.1 | purA | BAZSYMB_SCAFFOLD00024_5 | BAZSYMB_SCAFFOLD00024_4 | Exoribonuclease R; Belongs to the RNR ribonuclease family. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.763 |
SEH94433.1 | rplE | BAZSYMB_SCAFFOLD00024_5 | BAZSYMB_GORF58_GLIMMER3 | Exoribonuclease R; Belongs to the RNR ribonuclease family. | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.718 |
SEH94433.1 | rplJ | BAZSYMB_SCAFFOLD00024_5 | BAZSYMB_SCAFFOLD00004_14 | Exoribonuclease R; Belongs to the RNR ribonuclease family. | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.726 |
SEH94433.1 | rplV | BAZSYMB_SCAFFOLD00024_5 | BAZSYMB_GORF65_GLIMMER3 | Exoribonuclease R; Belongs to the RNR ribonuclease family. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.729 |
SEH94433.1 | rplW | BAZSYMB_SCAFFOLD00024_5 | BAZSYMB_GORF69_GLIMMER3 | Exoribonuclease R; Belongs to the RNR ribonuclease family. | 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.745 |
SEH94433.1 | rplX | BAZSYMB_SCAFFOLD00024_5 | BAZSYMB_GORF59_GLIMMER3 | Exoribonuclease R; Belongs to the RNR ribonuclease family. | 50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.725 |
SEH94433.1 | rpmC | BAZSYMB_SCAFFOLD00024_5 | BAZSYMB_GORF62_GLIMMER3 | Exoribonuclease R; Belongs to the RNR ribonuclease family. | 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.717 |
SEH94433.1 | rppH | BAZSYMB_SCAFFOLD00024_5 | BAZSYMB_SCAFFOLD00074_2 | Exoribonuclease R; Belongs to the RNR ribonuclease family. | Dinucleoside polyphosphate hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily. | 0.900 |
purA | SEH88145.1 | BAZSYMB_SCAFFOLD00024_4 | BAZSYMB_SCAFFOLD00030_5 | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | Thiamine monophosphate synthase; Belongs to the Nudix hydrolase family. | 0.499 |